STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT63695.1Por secretion system C-terminal sorting domain-containing protein. (970 aa)    
Predicted Functional Partners:
GAT62116.1
Starch synthase.
 
 
 0.898
PJIAN_134
Starch phosphorylase.
 
 0.896
GAT61553.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.865
GAT63693.1
Starch-binding associating with outer membrane.
 
     0.854
GAT63697.1
4-alpha-glucanotransferase.
 
 
 0.830
GAT63696.1
LacI family transcriptional regulator.
 
     0.825
GAT63692.1
Iron complex outermembrane recepter protein.
 
     0.814
GAT63694.1
Hypothetical protein.
 
     0.802
GAT62977.1
Hypothetical protein.
 
  
  0.780
GAT63698.1
Maltose/maltooligosaccharide transporter.
 
     0.777
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.