STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_424Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. (539 aa)    
Predicted Functional Partners:
PJIAN_423
Serine O-acetyltransferase.
       0.634
GAT64151.1
Membrane-bound lytic murein transglycosylase D.
 
  
 0.539
GAT61910.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
   0.489
PJIAN_425
O-acetylhomoserine (thiol)-lyase.
       0.448
secF
SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
 
  0.421
GAT62402.1
Peptidase family M23.
 
 
 
 0.410
GAT63042.1
Penicillin-binding protein 1A.
  
   
 0.407
GAT61606.1
Peptidyl-prolyl cis-trans isomerase SurA.
  
   0.400
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.