STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT63704.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
PJIAN_28
Hypothetical protein.
  
     0.546
GAT63705.1
Hypothetical protein.
       0.538
GAT63345.1
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.531
GAT62184.1
AhpC/TSA family protein.
  
     0.510
GAT63706.1
Membrane protease YdiL, CAAX protease family.
       0.509
GAT63703.1
Putative hydrolases of HD superfamily.
       0.494
GAT62920.1
Tetratricopeptide repeat-containing protein.
  
     0.472
GAT61749.1
Hypothetical protein.
  
     0.459
GAT62433.1
CarboxypepD_reg-like domain-containing protein.
  
     0.440
GAT62947.1
CarboxypepD_reg-like domain-containing protein.
  
     0.428
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.