Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT63767.1 | GAT63768.1 | PJIAN_4308 | PJIAN_4309 | Hypothetical protein. | Hypothetical protein. | 0.686 |
GAT63767.1 | GAT63769.1 | PJIAN_4308 | PJIAN_4310 | Hypothetical protein. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.543 |
GAT63767.1 | GAT63771.1 | PJIAN_4308 | PJIAN_4312 | Hypothetical protein. | Hypothetical protein. | 0.426 |
GAT63767.1 | pdxH | PJIAN_4308 | PJIAN_4311 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.497 |
GAT63768.1 | GAT63767.1 | PJIAN_4309 | PJIAN_4308 | Hypothetical protein. | Hypothetical protein. | 0.686 |
GAT63768.1 | GAT63769.1 | PJIAN_4309 | PJIAN_4310 | Hypothetical protein. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.608 |
GAT63768.1 | GAT63771.1 | PJIAN_4309 | PJIAN_4312 | Hypothetical protein. | Hypothetical protein. | 0.472 |
GAT63768.1 | pdxH | PJIAN_4309 | PJIAN_4311 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.554 |
GAT63769.1 | GAT63767.1 | PJIAN_4310 | PJIAN_4308 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Hypothetical protein. | 0.543 |
GAT63769.1 | GAT63768.1 | PJIAN_4310 | PJIAN_4309 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Hypothetical protein. | 0.608 |
GAT63769.1 | GAT63771.1 | PJIAN_4310 | PJIAN_4312 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Hypothetical protein. | 0.590 |
GAT63769.1 | pdxH | PJIAN_4310 | PJIAN_4311 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.701 |
GAT63771.1 | GAT63767.1 | PJIAN_4312 | PJIAN_4308 | Hypothetical protein. | Hypothetical protein. | 0.426 |
GAT63771.1 | GAT63768.1 | PJIAN_4312 | PJIAN_4309 | Hypothetical protein. | Hypothetical protein. | 0.472 |
GAT63771.1 | GAT63769.1 | PJIAN_4312 | PJIAN_4310 | Hypothetical protein. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.590 |
GAT63771.1 | pdxH | PJIAN_4312 | PJIAN_4311 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.648 |
pdxH | GAT63767.1 | PJIAN_4311 | PJIAN_4308 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | Hypothetical protein. | 0.497 |
pdxH | GAT63768.1 | PJIAN_4311 | PJIAN_4309 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | Hypothetical protein. | 0.554 |
pdxH | GAT63769.1 | PJIAN_4311 | PJIAN_4310 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.701 |
pdxH | GAT63771.1 | PJIAN_4311 | PJIAN_4312 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | Hypothetical protein. | 0.648 |