STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT63797.1Conserved repeat domain-containing protein. (753 aa)    
Predicted Functional Partners:
GAT63799.1
Hypothetical protein.
 
     0.793
GAT62149.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.769
GAT63205.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.768
PJIAN_42
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.768
GAT64369.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.768
GAT62635.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.763
GAT63798.1
Legume lectin domain-containing protein.
    
  0.757
PJIAN_167
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.756
GAT62633.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.753
GAT63204.1
WD40-like beta propeller repeat-containing protein.
  
 
   0.752
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.