STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT63867.1OmpA family protein. (374 aa)    
Predicted Functional Partners:
GAT63618.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.694
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.679
GAT62427.1
Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
  0.648
PJIAN_472
Hypothetical protein.
   
 
 0.516
GAT63276.1
Outer membrane protein OmpA.
  
     0.515
GAT61910.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
   0.475
PJIAN_179
Lipoprotein-releasing system permease protein.
  
 
   0.475
GAT63025.1
WD40-like beta propeller repeat-containing protein.
  
   0.471
GAT62925.1
LysM domain-containing protein.
 
 
 0.438
rpsF
Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
   0.433
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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