STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64010.1Leucine rich repeat-containing protein. (1381 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.714
GAT63618.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.698
PJIAN_466
N-terminal ig-like domain of cellulase.
  
  0.537
GAT64008.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.508
GAT64009.1
Sugar transferase.
       0.508
GAT63409.1
N-terminal ig-like domain of cellulase.
  
  0.495
GAT63012.1
N-terminal ig-like domain of cellulase.
  
  0.456
GAT63025.1
WD40-like beta propeller repeat-containing protein.
  
 
  0.436
GAT64191.1
Immunoglobulin domain-containing protein.
  
 
  
0.408
GAT64285.1
Lysophospholipase L1.
  
  0.402
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.