STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64016.1Predicted acyltransferase. (380 aa)    
Predicted Functional Partners:
GAT64015.1
alpha-N-acetylglucosaminidase.
 
     0.643
GAT64017.1
Starch-binding associating with outer membrane.
 
     0.547
GAT64014.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
       0.535
GAT64018.1
Iron complex outermembrane recepter protein.
 
     0.489
PJIAN_359
Acetyl esterase.
  
     0.486
GAT63089.1
Glucosamine-6-phosphate deaminase.
 
    0.447
GAT64013.1
Alpha-1,2-mannosidase.
       0.440
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.