STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64090.1Hypothetical protein. (275 aa)    
Predicted Functional Partners:
GAT64089.1
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD.
  
    0.811
GAT64091.1
UDP-2,3-diacylglucosamine pyrophosphatase LpxH.
       0.543
GAT63323.1
Hypothetical protein.
  
     0.506
GAT64083.1
Hypothetical protein.
  
     0.493
GAT63139.1
Hypothetical protein.
  
     0.492
GAT64055.1
Hypothetical protein.
  
     0.478
PJIAN_35
Hypothetical protein.
  
     0.443
GAT62317.1
Gliding motility-associated lipoprotein GldH.
  
     0.402
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.