STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64096.1Hypothetical protein. (576 aa)    
Predicted Functional Partners:
GAT63345.1
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.658
GAT63110.1
Maltoporin.
  
     0.625
GAT61749.1
Hypothetical protein.
  
     0.544
GAT61748.1
Hypothetical protein.
  
     0.542
GAT63283.1
WD40-like beta propeller repeat-containing protein.
  
     0.512
GAT63412.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.506
GAT61751.1
Hypothetical protein.
  
     0.494
GAT64097.1
Hypothetical protein.
       0.485
PJIAN_360
TonB-dependent outer membrane receptor, SusC/RagA subfamily.
  
     0.482
GAT63919.1
Hypothetical protein.
  
     0.473
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.