STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64165.1Alpha-galactosidase. (405 aa)    
Predicted Functional Partners:
GAT64276.1
Beta-galactosidase.
 
  
 0.834
GAT63431.1
Alpha galactosidase A.
  
  
 
0.790
GAT63429.1
Alpha-galactosidase.
  
  
 
0.769
GAT63440.1
Beta-galactosidase.
  
  
  0.766
GAT64278.1
Beta-galactosidase.
  
  
  0.761
GAT64169.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.749
GAT64163.1
Mannobiose 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
 
     0.743
GAT62921.1
Alpha-glucosidase.
  
  
  0.722
GAT61754.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
    
  0.721
GAT63587.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
    
  0.721
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.