STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64284.1Tat (twin-arginine translocation) pathway signal sequence. (261 aa)    
Predicted Functional Partners:
GAT64283.1
S-formylglutathione hydrolase FrmB.
 
     0.803
GAT64285.1
Lysophospholipase L1.
      0.766
GAT64282.1
Beta-galactosidase.
 
    0.640
GAT64281.1
alpha-N-arabinofuranosidase.
 
     0.564
GAT64286.1
Hypothetical protein.
       0.517
GAT64287.1
Beta-propeller repeat-containing protein.
   
   0.428
GAT64233.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
   
  0.407
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.