Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAT63104.1 | GAT64339.1 | PJIAN_3418 | PJIAN_4889 | IMP dehydrogenase. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.406 |
| GAT64337.1 | GAT64338.1 | PJIAN_4887 | PJIAN_4888 | Thiol:disulfide interchange protein DsbD. | L-cysteine desulfidase; Belongs to the UPF0597 family. | 0.547 |
| GAT64337.1 | GAT64339.1 | PJIAN_4887 | PJIAN_4889 | Thiol:disulfide interchange protein DsbD. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.413 |
| GAT64338.1 | GAT64337.1 | PJIAN_4888 | PJIAN_4887 | L-cysteine desulfidase; Belongs to the UPF0597 family. | Thiol:disulfide interchange protein DsbD. | 0.547 |
| GAT64338.1 | GAT64339.1 | PJIAN_4888 | PJIAN_4889 | L-cysteine desulfidase; Belongs to the UPF0597 family. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.561 |
| GAT64338.1 | GAT64340.1 | PJIAN_4888 | PJIAN_4890 | L-cysteine desulfidase; Belongs to the UPF0597 family. | Hypothetical protein. | 0.557 |
| GAT64338.1 | GAT64341.1 | PJIAN_4888 | PJIAN_4891 | L-cysteine desulfidase; Belongs to the UPF0597 family. | Conserved hypothetical protein. | 0.553 |
| GAT64339.1 | GAT63104.1 | PJIAN_4889 | PJIAN_3418 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | IMP dehydrogenase. | 0.406 |
| GAT64339.1 | GAT64337.1 | PJIAN_4889 | PJIAN_4887 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Thiol:disulfide interchange protein DsbD. | 0.413 |
| GAT64339.1 | GAT64338.1 | PJIAN_4889 | PJIAN_4888 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | L-cysteine desulfidase; Belongs to the UPF0597 family. | 0.561 |
| GAT64339.1 | GAT64340.1 | PJIAN_4889 | PJIAN_4890 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Hypothetical protein. | 0.768 |
| GAT64339.1 | GAT64341.1 | PJIAN_4889 | PJIAN_4891 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Conserved hypothetical protein. | 0.762 |
| GAT64339.1 | GAT64342.1 | PJIAN_4889 | PJIAN_4892 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.489 |
| GAT64339.1 | panC | PJIAN_4889 | PJIAN_1667 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.534 |
| GAT64339.1 | rimO | PJIAN_4889 | PJIAN_4893 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.408 |
| GAT64340.1 | GAT64338.1 | PJIAN_4890 | PJIAN_4888 | Hypothetical protein. | L-cysteine desulfidase; Belongs to the UPF0597 family. | 0.557 |
| GAT64340.1 | GAT64339.1 | PJIAN_4890 | PJIAN_4889 | Hypothetical protein. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.768 |
| GAT64340.1 | GAT64341.1 | PJIAN_4890 | PJIAN_4891 | Hypothetical protein. | Conserved hypothetical protein. | 0.768 |
| GAT64340.1 | GAT64342.1 | PJIAN_4890 | PJIAN_4892 | Hypothetical protein. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.468 |
| GAT64341.1 | GAT64338.1 | PJIAN_4891 | PJIAN_4888 | Conserved hypothetical protein. | L-cysteine desulfidase; Belongs to the UPF0597 family. | 0.553 |
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