STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaQ1DNA polymerase III subunit epsilon. (348 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 0.952
dnaE
DNA polymerase III subunit alpha.
   
 0.952
dnaX
DNA polymerase III subunit gamma/tau.
   
 0.949
holA
DNA polymerase III subunit delta.
    
 0.932
dnaX-2
DNA polymerase III subunit gamma/tau.
   
  0.895
ADL10835.1
DNA polymerase III PolC.
 
  
  0.889
dnaQ2
DNA polymerase III subunit epsilon.
  
  
  0.887
cobQ
Cobyric acid synthase.
       0.833
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
       0.833
ADL10296.1
Hypothetical protein.
  
     0.670
Your Current Organism:
Corynebacterium pseudotuberculosis
NCBI taxonomy Id: 681645
Other names: C. pseudotuberculosis C231, Corynebacterium pseudotuberculosis C231, Corynebacterium pseudotuberculosis str. C231, Corynebacterium pseudotuberculosis strain C231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.