STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmlBdTDP-4-dehydrorhamnose 3,5-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (334 aa)    
Predicted Functional Partners:
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
 
 0.999
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.999
glf
UDP-galactopyranose mutase.
  
 
 0.913
wbbL
dTDP-Rha:alpha-D-GlcNAc-pyrophosphate polyprenol, alpha-3-L-rhamnosyltransferase.
 
  
 0.858
ADL10054.1
Non-ribosomal peptide synthetase.
  
 
 0.823
galE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
0.803
ADL09732.1
Peptidase family M1 containing protein.
       0.795
ADL09733.1
Serine proteases of the peptidase family S9A.
       0.795
manC
Mannose-1-phosphate guanylyltransferase.
  
 
 0.789
rfe
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase.
  
  
 0.758
Your Current Organism:
Corynebacterium pseudotuberculosis
NCBI taxonomy Id: 681645
Other names: C. pseudotuberculosis C231, Corynebacterium pseudotuberculosis C231, Corynebacterium pseudotuberculosis str. C231, Corynebacterium pseudotuberculosis strain C231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.