Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADL10547.2 | ADL10887.2 | CpC231_1071 | CpC231_1416 | Invasion-associated protein p60. | Cell-wall peptidase NlpC/P60 protein. | 0.571 |
ADL10547.2 | cwlM | CpC231_1071 | CpC231_2095 | Invasion-associated protein p60. | N-Acetymuramyl-L-Alanine Amidase. | 0.792 |
ADL10547.2 | ftsE | CpC231_1071 | CpC231_0581 | Invasion-associated protein p60. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.453 |
ADL10547.2 | ftsW1 | CpC231_1071 | CpC231_1391 | Invasion-associated protein p60. | Cell division protein ftsW; Belongs to the SEDS family. | 0.639 |
ADL10547.2 | ftsX | CpC231_1071 | CpC231_0582 | Invasion-associated protein p60. | Cell division protein ftsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.910 |
ADL10831.1 | ftsE | CpC231_1360 | CpC231_0581 | Hypothetical protein. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.758 |
ADL10831.1 | ftsX | CpC231_1360 | CpC231_0582 | Hypothetical protein. | Cell division protein ftsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.613 |
ADL10887.2 | ADL10547.2 | CpC231_1416 | CpC231_1071 | Cell-wall peptidase NlpC/P60 protein. | Invasion-associated protein p60. | 0.571 |
ADL10887.2 | cwlM | CpC231_1416 | CpC231_2095 | Cell-wall peptidase NlpC/P60 protein. | N-Acetymuramyl-L-Alanine Amidase. | 0.872 |
ADL10887.2 | ftsE | CpC231_1416 | CpC231_0581 | Cell-wall peptidase NlpC/P60 protein. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.643 |
ADL10887.2 | ftsX | CpC231_1416 | CpC231_0582 | Cell-wall peptidase NlpC/P60 protein. | Cell division protein ftsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.593 |
AEK49243.1 | ftsE | CpC231_0580a | CpC231_0581 | Hypothetical protein. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.566 |
AEK49243.1 | ftsX | CpC231_0580a | CpC231_0582 | Hypothetical protein. | Cell division protein ftsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.520 |
cwlM | ADL10547.2 | CpC231_2095 | CpC231_1071 | N-Acetymuramyl-L-Alanine Amidase. | Invasion-associated protein p60. | 0.792 |
cwlM | ADL10887.2 | CpC231_2095 | CpC231_1416 | N-Acetymuramyl-L-Alanine Amidase. | Cell-wall peptidase NlpC/P60 protein. | 0.872 |
cwlM | ftsE | CpC231_2095 | CpC231_0581 | N-Acetymuramyl-L-Alanine Amidase. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.572 |
cwlM | ftsX | CpC231_2095 | CpC231_0582 | N-Acetymuramyl-L-Alanine Amidase. | Cell division protein ftsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.634 |
cwlM | ftsZ | CpC231_2095 | CpC231_1387 | N-Acetymuramyl-L-Alanine Amidase. | Cell division protein ftsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.467 |
ftsE | ADL10547.2 | CpC231_0581 | CpC231_1071 | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | Invasion-associated protein p60. | 0.453 |
ftsE | ADL10831.1 | CpC231_0581 | CpC231_1360 | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | Hypothetical protein. | 0.758 |
page 1 of 3