Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADL10405.1 | atrC | CpC231_0926 | CpC231_0925 | ABC transporter domain-containing protein. | ABC transporter ATP-binding protein. | 0.999 |
ADL10405.1 | gluA | CpC231_0926 | CpC231_0646 | ABC transporter domain-containing protein. | Glutamate ABC transporter domain-containing ATP-binding protein. | 0.988 |
ADL10405.1 | gluB | CpC231_0926 | CpC231_0647 | ABC transporter domain-containing protein. | Glutamate-binding protein GluB; Belongs to the bacterial solute-binding protein 3 family. | 0.913 |
ADL10405.1 | gluC | CpC231_0926 | CpC231_0648 | ABC transporter domain-containing protein. | Glutamate transport system permease protein gluC. | 0.743 |
ADL10405.1 | gluD | CpC231_0926 | CpC231_0649 | ABC transporter domain-containing protein. | Glutamate transport system permease protein gluD. | 0.785 |
ADL10405.1 | pknD | CpC231_0926 | CpC231_0927 | ABC transporter domain-containing protein. | Serine/threonine-protein kinase PknD. | 0.964 |
atrC | ADL10405.1 | CpC231_0925 | CpC231_0926 | ABC transporter ATP-binding protein. | ABC transporter domain-containing protein. | 0.999 |
atrC | gluB | CpC231_0925 | CpC231_0647 | ABC transporter ATP-binding protein. | Glutamate-binding protein GluB; Belongs to the bacterial solute-binding protein 3 family. | 0.938 |
atrC | gluC | CpC231_0925 | CpC231_0648 | ABC transporter ATP-binding protein. | Glutamate transport system permease protein gluC. | 0.978 |
atrC | gluD | CpC231_0925 | CpC231_0649 | ABC transporter ATP-binding protein. | Glutamate transport system permease protein gluD. | 0.979 |
atrC | pknD | CpC231_0925 | CpC231_0927 | ABC transporter ATP-binding protein. | Serine/threonine-protein kinase PknD. | 0.966 |
citE | gluA | CpC231_0650 | CpC231_0646 | Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family. | Glutamate ABC transporter domain-containing ATP-binding protein. | 0.512 |
citE | gluB | CpC231_0650 | CpC231_0647 | Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family. | Glutamate-binding protein GluB; Belongs to the bacterial solute-binding protein 3 family. | 0.646 |
citE | gluC | CpC231_0650 | CpC231_0648 | Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family. | Glutamate transport system permease protein gluC. | 0.741 |
citE | gluD | CpC231_0650 | CpC231_0649 | Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family. | Glutamate transport system permease protein gluD. | 0.741 |
csm | gluB | CpC231_0640 | CpC231_0647 | Chorismate mutase. | Glutamate-binding protein GluB; Belongs to the bacterial solute-binding protein 3 family. | 0.586 |
csm | pheA | CpC231_0640 | CpC231_1973 | Chorismate mutase. | Prephenate dehydratase. | 0.900 |
csm | tyrA | CpC231_0640 | CpC231_0133 | Chorismate mutase. | Prephenate dehydrogenase. | 0.964 |
gluA | ADL10405.1 | CpC231_0646 | CpC231_0926 | Glutamate ABC transporter domain-containing ATP-binding protein. | ABC transporter domain-containing protein. | 0.988 |
gluA | citE | CpC231_0646 | CpC231_0650 | Glutamate ABC transporter domain-containing ATP-binding protein. | Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family. | 0.512 |
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