STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL11445.1LSR2-like protein. (106 aa)    
Predicted Functional Partners:
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   
 0.847
mihF
Integration host factor MihF.
  
   
 0.827
mshC
L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.
      
 0.777
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
      
 0.776
ADL10084.1
Hypothetical protein.
  
     0.601
ADL10668.1
Chlorite dismutase.
  
     0.535
whiA
Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
  
   
 0.529
ADL10963.1
Hypothetical protein.
  
     0.500
ADL10347.1
Hypothetical protein.
  
     0.463
pknG
Serine/threonine-protein kinase PknG.
      
 0.446
Your Current Organism:
Corynebacterium pseudotuberculosis
NCBI taxonomy Id: 681645
Other names: C. pseudotuberculosis C231, Corynebacterium pseudotuberculosis C231, Corynebacterium pseudotuberculosis str. C231, Corynebacterium pseudotuberculosis strain C231
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