STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwlMN-Acetymuramyl-L-Alanine Amidase. (398 aa)    
Predicted Functional Partners:
ADL10887.2
Cell-wall peptidase NlpC/P60 protein.
  
  
 0.872
dacA
D-alanyl-D-alanine carboxypeptidase dacA; Belongs to the peptidase S11 family.
 
 
 0.844
ADL10547.2
Invasion-associated protein p60.
 
  
 0.792
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.779
trxA1-2
Thioredoxin; Belongs to the thioredoxin family.
   
   0.737
ADL11416.2
Peptidoglycan recognition protein.
   
  
 0.715
ybhB
Rhomboid family protein.
  
   0.710
ADL11122.1
Rhomboid family protein.
  
   0.710
csm
Chorismate mutase.
  
     0.690
ADL10882.1
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.690
Your Current Organism:
Corynebacterium pseudotuberculosis
NCBI taxonomy Id: 681645
Other names: C. pseudotuberculosis C231, Corynebacterium pseudotuberculosis C231, Corynebacterium pseudotuberculosis str. C231, Corynebacterium pseudotuberculosis strain C231
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.