STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAUnannotated protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (499 aa)    
Predicted Functional Partners:
UK23_44620
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  0.991
UK23_44615
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  0.985
GCA_000974445_00324
Unannotated protein.
  0.971
UK23_44610
Unannotated protein.
 
 0.957
UK23_41780
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  0.948
UK23_20925
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  0.940
GCA_000974445_05463
Unannotated protein.
  0.938
UK23_21890
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  0.936
UK23_21895
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  0.915
UK23_11685
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  0.911
Your Current Organism:
Lentzea aerocolonigenes
NCBI taxonomy Id: 68170
Other names: ATCC 23870, BCRC 13661, CCRC 13661, CCRC:13661, CIP 107109, DSM 40034, IFO 13195, ISP 5034, JCM 4150, JCM 4614, L. aerocolonigenes, Lechevalieria aerocolonigenes, NBRC 13195, NRRL B-3298, NRRL ISP-5034, Nocardia aerocolonigenes, Saccharothrix aerocolonigenes, Streptomyces aerocolonigenes, strain Shinobu N 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.