STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000521215_02946Unannotated protein. (593 aa)    
Predicted Functional Partners:
GCA_000521215_00005
Unannotated protein.
 
 0.977
GCA_000521215_02944
Unannotated protein.
 
  
  0.937
GCA_000521215_06713
Unannotated protein.
 
 
 0.933
GCA_000521215_02945
Unannotated protein.
 
 
  0.919
GCA_000521215_06737
Unannotated protein.
 
 
 0.761
GCA_000521215_00776
Unannotated protein.
 
 0.751
GCA_000521215_03575
Unannotated protein.
  
 
 0.741
GCA_000521215_07237
Unannotated protein.
  
 
 0.741
GCA_000521215_02012
Unannotated protein.
 
 0.733
GCA_000521215_03666
Unannotated protein.
    
 0.726
Your Current Organism:
Labrenzia sp. DG1229
NCBI taxonomy Id: 681847
Other names: L. sp. DG1229
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.