STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000521215_03778Unannotated protein. (450 aa)    
Predicted Functional Partners:
GCA_000521215_05728
Unannotated protein.
   
 
 0.729
GCA_000521215_04153
Unannotated protein.
  
    0.690
GCA_000521215_01929
Unannotated protein.
   
 
  0.689
GCA_000521215_03779
Unannotated protein.
   
   0.654
GCA_000521215_02089
Unannotated protein.
   
  
 0.574
GCA_000521215_04572
Unannotated protein.
   
  
 0.574
GCA_000521215_07010
Unannotated protein.
   
  
 0.574
GCA_000521215_01775
Unannotated protein.
  
 
  0.571
GCA_000521215_06068
Unannotated protein.
  
 
  0.543
GCA_000521215_07277
Unannotated protein.
    
  0.542
Your Current Organism:
Labrenzia sp. DG1229
NCBI taxonomy Id: 681847
Other names: L. sp. DG1229
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.