STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725475_00519Unannotated protein. (659 aa)    
Predicted Functional Partners:
GCA_000725475_00518
Unannotated protein.
   
 0.967
GCA_000725475_00517
Unannotated protein.
 
  
 0.892
GCA_000725475_06194
Unannotated protein.
  
 
  0.870
GCA_000725475_06073
Unannotated protein.
    
  0.860
GCA_000725475_05692
Unannotated protein.
     
 0.805
GCA_000725475_04900
Unannotated protein.
    
  0.804
GCA_000725475_05451
Unannotated protein.
  
 
 0.772
GCA_000725475_08131
Unannotated protein.
  
 
 0.772
GCA_000725475_08439
Unannotated protein.
  
 
 0.756
GCA_000725475_02576
Unannotated protein.
 
  0.737
Your Current Organism:
Streptomyces durhamensis
NCBI taxonomy Id: 68194
Other names: ATCC 23194, CBS 742.72, DSM 40539, IFO 13441, IMET 43359, ISP 5539, JCM 4291, JCM 4747, KCTC 9723, NBRC 13441, NRRL B-3309, NRRL-ISP 5539, S. durhamensis, VKM Ac-763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.