STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725475_02674Unannotated protein. (134 aa)    
Predicted Functional Partners:
GCA_000725475_02676
Unannotated protein.
 
     0.888
GCA_000725475_02675
Unannotated protein.
       0.877
GCA_000725475_02673
Unannotated protein.
       0.775
GCA_000725475_02672
Unannotated protein.
       0.700
GCA_000725475_02669
Unannotated protein.
       0.690
GCA_000725475_02670
Unannotated protein.
       0.690
GCA_000725475_00159
Unannotated protein.
  
     0.512
GCA_000725475_00147
Unannotated protein.
  
     0.463
GCA_000725475_02671
Unannotated protein.
       0.454
GCA_000725475_04346
Unannotated protein.
  
     0.443
Your Current Organism:
Streptomyces durhamensis
NCBI taxonomy Id: 68194
Other names: ATCC 23194, CBS 742.72, DSM 40539, IFO 13441, IMET 43359, ISP 5539, JCM 4291, JCM 4747, KCTC 9723, NBRC 13441, NRRL B-3309, NRRL-ISP 5539, S. durhamensis, VKM Ac-763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.