STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725475_05402Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_000725475_08194
Unannotated protein.
 
   0.799
GCA_000725475_02351
Unannotated protein.
  
   0.712
GCA_000725475_02370
Unannotated protein.
  
   0.712
GCA_000725475_05848
Unannotated protein.
  
   0.712
GCA_000725475_03276
Unannotated protein.
 
     0.541
GCA_000725475_04988
Unannotated protein.
  
     0.537
GCA_000725475_05404
Unannotated protein.
       0.454
GCA_000725475_05401
Unannotated protein.
 
     0.428
GCA_000725475_05562
Unannotated protein.
  
     0.423
GCA_000725475_05403
Unannotated protein.
       0.409
Your Current Organism:
Streptomyces durhamensis
NCBI taxonomy Id: 68194
Other names: ATCC 23194, CBS 742.72, DSM 40539, IFO 13441, IMET 43359, ISP 5539, JCM 4291, JCM 4747, KCTC 9723, NBRC 13441, NRRL B-3309, NRRL-ISP 5539, S. durhamensis, VKM Ac-763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.