Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANP56384.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)    
Predicted Functional Partners:
ANP49728.1
Acylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.750
ANP49729.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
ANP57007.1
Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
   
   0.594
AVL59_09025
Chromosome segregation protein SMC; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.524
ANP48238.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.430
ANP48909.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.430
ANP49553.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.430
ANP49562.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.430
ANP49896.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.430
ANP50917.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.430
Your Current Organism:
Streptomyces griseochromogenes
NCBI taxonomy Id: 68214
Other names: ATCC 14511, BCRC 11818, CBS 714.72, CCRC 11818, CCRC:11818, DSM 40499, IFO 13413, ISP 5499, JCM 4039, JCM 4764, KCTC 9027, NBRC 13413, NRRL B-12423, NRRL-ISP 5499, S. griseochromogenes, Streptomyces griseichromogenes
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