Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VR44_04660 | VR44_07955 | GCA_002028425_06933 | GCA_002028425_01040 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.864 |
VR44_04660 | VR44_24345 | GCA_002028425_06933 | GCA_002028425_01958 | Unannotated protein. | Unannotated protein. | 0.951 |
VR44_04660 | VR44_27245 | GCA_002028425_06933 | GCA_002028425_01148 | Unannotated protein. | Unannotated protein. | 0.864 |
VR44_04660 | VR44_28705 | GCA_002028425_06933 | GCA_002028425_04433 | Unannotated protein. | Unannotated protein. | 0.864 |
VR44_04660 | VR44_28710 | GCA_002028425_06933 | GCA_002028425_04434 | Unannotated protein. | Unannotated protein. | 0.864 |
VR44_04660 | VR44_31265 | GCA_002028425_06933 | GCA_002028425_04130 | Unannotated protein. | Unannotated protein. | 0.864 |
VR44_04660 | VR44_33315 | GCA_002028425_06933 | GCA_002028425_02255 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.864 |
VR44_04660 | VR44_36060 | GCA_002028425_06933 | GCA_002028425_06109 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.864 |
VR44_04660 | gabD2 | GCA_002028425_06933 | GCA_002028425_04329 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.864 |
VR44_07955 | VR44_04660 | GCA_002028425_01040 | GCA_002028425_06933 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.864 |
VR44_07955 | VR44_24345 | GCA_002028425_01040 | GCA_002028425_01958 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.874 |
VR44_07955 | VR44_27245 | GCA_002028425_01040 | GCA_002028425_01148 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.670 |
VR44_07955 | VR44_28700 | GCA_002028425_01040 | GCA_002028425_04432 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | 0.575 |
VR44_07955 | VR44_28705 | GCA_002028425_01040 | GCA_002028425_04433 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.800 |
VR44_07955 | VR44_28710 | GCA_002028425_01040 | GCA_002028425_04434 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.902 |
VR44_07955 | VR44_33315 | GCA_002028425_01040 | GCA_002028425_02255 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.551 |
VR44_07955 | gabD2 | GCA_002028425_01040 | GCA_002028425_04329 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.696 |
VR44_24345 | VR44_04660 | GCA_002028425_01958 | GCA_002028425_06933 | Unannotated protein. | Unannotated protein. | 0.951 |
VR44_24345 | VR44_07955 | GCA_002028425_01958 | GCA_002028425_01040 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.874 |
VR44_24345 | VR44_27245 | GCA_002028425_01958 | GCA_002028425_01148 | Unannotated protein. | Unannotated protein. | 0.866 |
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