Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_002028425_00386 | VR44_20625 | GCA_002028425_00386 | GCA_002028425_01194 | Unannotated protein. | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.851 |
GCA_002028425_00386 | VR44_22040 | GCA_002028425_00386 | GCA_002028425_06581 | Unannotated protein. | Unannotated protein. | 0.521 |
GCA_002028425_00386 | VR44_33560 | GCA_002028425_00386 | GCA_002028425_04662 | Unannotated protein. | Unannotated protein; Belongs to the LOG family. | 0.466 |
GCA_002028425_00386 | apt | GCA_002028425_00386 | GCA_002028425_01434 | Unannotated protein. | Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.837 |
GCA_002028425_00386 | mqnB | GCA_002028425_00386 | GCA_002028425_03993 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.515 |
GCA_002028425_00386 | tadA | GCA_002028425_00386 | GCA_002028425_03684 | Unannotated protein. | Unannotated protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.456 |
VR44_20625 | GCA_002028425_00386 | GCA_002028425_01194 | GCA_002028425_00386 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein. | 0.851 |
VR44_20625 | VR44_22040 | GCA_002028425_01194 | GCA_002028425_06581 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein. | 0.520 |
VR44_20625 | VR44_33560 | GCA_002028425_01194 | GCA_002028425_04662 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein; Belongs to the LOG family. | 0.462 |
VR44_20625 | apt | GCA_002028425_01194 | GCA_002028425_01434 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.980 |
VR44_20625 | mqnB | GCA_002028425_01194 | GCA_002028425_03993 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.512 |
VR44_22040 | GCA_002028425_00386 | GCA_002028425_06581 | GCA_002028425_00386 | Unannotated protein. | Unannotated protein. | 0.521 |
VR44_22040 | VR44_20625 | GCA_002028425_06581 | GCA_002028425_01194 | Unannotated protein. | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.520 |
VR44_22040 | VR44_33560 | GCA_002028425_06581 | GCA_002028425_04662 | Unannotated protein. | Unannotated protein; Belongs to the LOG family. | 0.461 |
VR44_22040 | apt | GCA_002028425_06581 | GCA_002028425_01434 | Unannotated protein. | Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.636 |
VR44_22040 | tadA | GCA_002028425_06581 | GCA_002028425_03684 | Unannotated protein. | Unannotated protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.539 |
VR44_33560 | GCA_002028425_00386 | GCA_002028425_04662 | GCA_002028425_00386 | Unannotated protein; Belongs to the LOG family. | Unannotated protein. | 0.466 |
VR44_33560 | VR44_20625 | GCA_002028425_04662 | GCA_002028425_01194 | Unannotated protein; Belongs to the LOG family. | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.462 |
VR44_33560 | VR44_22040 | GCA_002028425_04662 | GCA_002028425_06581 | Unannotated protein; Belongs to the LOG family. | Unannotated protein. | 0.461 |
VR44_33560 | VR44_33565 | GCA_002028425_04662 | GCA_002028425_04661 | Unannotated protein; Belongs to the LOG family. | Unannotated protein. | 0.826 |
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