Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_002028425_05682 | GCA_002028425_05683 | GCA_002028425_05682 | GCA_002028425_05683 | Unannotated protein. | Unannotated protein. | 0.574 |
GCA_002028425_05683 | GCA_002028425_05682 | GCA_002028425_05683 | GCA_002028425_05682 | Unannotated protein. | Unannotated protein. | 0.574 |
GCA_002028425_05683 | GCA_002028425_05690 | GCA_002028425_05683 | GCA_002028425_05690 | Unannotated protein. | Unannotated protein. | 0.561 |
GCA_002028425_05683 | GCA_002028425_06781 | GCA_002028425_05683 | GCA_002028425_06781 | Unannotated protein. | Unannotated protein. | 0.766 |
GCA_002028425_05683 | VR44_06110 | GCA_002028425_05683 | GCA_002028425_04779 | Unannotated protein. | Unannotated protein. | 0.659 |
GCA_002028425_05683 | VR44_21785 | GCA_002028425_05683 | GCA_002028425_03150 | Unannotated protein. | Unannotated protein; Belongs to the ClpA/ClpB family. | 0.659 |
GCA_002028425_05683 | VR44_23215 | GCA_002028425_05683 | GCA_002028425_05224 | Unannotated protein. | Unannotated protein. | 0.659 |
GCA_002028425_05683 | VR44_35830 | GCA_002028425_05683 | GCA_002028425_00463 | Unannotated protein. | Unannotated protein. | 0.624 |
GCA_002028425_05683 | clpB | GCA_002028425_05683 | GCA_002028425_03354 | Unannotated protein. | Unannotated protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.659 |
GCA_002028425_05683 | dnaK | GCA_002028425_05683 | GCA_002028425_03362 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.561 |
GCA_002028425_05683 | grpE | GCA_002028425_05683 | GCA_002028425_03361 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.576 |
GCA_002028425_05690 | GCA_002028425_05683 | GCA_002028425_05690 | GCA_002028425_05683 | Unannotated protein. | Unannotated protein. | 0.561 |
GCA_002028425_05690 | GCA_002028425_06781 | GCA_002028425_05690 | GCA_002028425_06781 | Unannotated protein. | Unannotated protein. | 0.539 |
GCA_002028425_05690 | VR44_06110 | GCA_002028425_05690 | GCA_002028425_04779 | Unannotated protein. | Unannotated protein. | 0.982 |
GCA_002028425_05690 | VR44_21785 | GCA_002028425_05690 | GCA_002028425_03150 | Unannotated protein. | Unannotated protein; Belongs to the ClpA/ClpB family. | 0.982 |
GCA_002028425_05690 | VR44_23215 | GCA_002028425_05690 | GCA_002028425_05224 | Unannotated protein. | Unannotated protein. | 0.982 |
GCA_002028425_05690 | VR44_35830 | GCA_002028425_05690 | GCA_002028425_00463 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_002028425_05690 | clpB | GCA_002028425_05690 | GCA_002028425_03354 | Unannotated protein. | Unannotated protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.993 |
GCA_002028425_05690 | dnaK | GCA_002028425_05690 | GCA_002028425_03362 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.504 |
GCA_002028425_05690 | grpE | GCA_002028425_05690 | GCA_002028425_03361 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.998 |
page 1 of 4