STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VR44_25580Unannotated protein. (242 aa)    
Predicted Functional Partners:
VR44_25585
Unannotated protein.
       0.565
GCA_002028425_01337
Unannotated protein.
  
     0.496
VR44_15915
Unannotated protein.
  
     0.484
VR44_14460
Unannotated protein.
  
     0.469
VR44_25590
Unannotated protein.
 
     0.463
VR44_10790
Unannotated protein.
  
     0.438
VR44_14465
Unannotated protein.
  
     0.429
VR44_18870
Unannotated protein.
  
     0.428
VR44_05095
Unannotated protein.
  
     0.423
VR44_32790
Unannotated protein.
  
     0.409
Your Current Organism:
Streptomyces katrae
NCBI taxonomy Id: 68223
Other names: ATCC 27440, CBS 748.72, DSM 40550, IFO 13447, IMET 43361, ISP 5550, JCM 4777, NBRC 13447, NRRL B-3093, NRRL-ISP 5550, RIA 794, S. katrae, Streptomyces katrensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.