Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_002028425_05668 | VR44_06780 | GCA_002028425_05668 | GCA_002028425_00666 | Unannotated protein. | Unannotated protein; Belongs to the carbohydrate kinase PfkB family. | 0.803 |
GCA_002028425_05668 | VR44_07815 | GCA_002028425_05668 | GCA_002028425_06410 | Unannotated protein. | Unannotated protein. | 0.846 |
GCA_002028425_05668 | VR44_10145 | GCA_002028425_05668 | GCA_002028425_01570 | Unannotated protein. | Unannotated protein; Belongs to the peptidase M50B family. | 0.828 |
GCA_002028425_05668 | VR44_29790 | GCA_002028425_05668 | GCA_002028425_03947 | Unannotated protein. | Unannotated protein; Belongs to the carbohydrate kinase PfkB family. | 0.803 |
VR44_05445 | VR44_07815 | GCA_002028425_01350 | GCA_002028425_06410 | Unannotated protein. | Unannotated protein. | 0.691 |
VR44_05445 | VR44_08570 | GCA_002028425_01350 | GCA_002028425_04199 | Unannotated protein. | Unannotated protein. | 0.402 |
VR44_05445 | VR44_23115 | GCA_002028425_01350 | GCA_002028425_05203 | Unannotated protein. | Unannotated protein. | 0.578 |
VR44_05445 | VR44_24345 | GCA_002028425_01350 | GCA_002028425_01958 | Unannotated protein. | Unannotated protein. | 0.903 |
VR44_05445 | guaA | GCA_002028425_01350 | GCA_002028425_04333 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.999 |
VR44_05445 | guaB | GCA_002028425_01350 | GCA_002028425_04317 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.947 |
VR44_06780 | GCA_002028425_05668 | GCA_002028425_00666 | GCA_002028425_05668 | Unannotated protein; Belongs to the carbohydrate kinase PfkB family. | Unannotated protein. | 0.803 |
VR44_06780 | VR44_07815 | GCA_002028425_00666 | GCA_002028425_06410 | Unannotated protein; Belongs to the carbohydrate kinase PfkB family. | Unannotated protein. | 0.762 |
VR44_06780 | VR44_10145 | GCA_002028425_00666 | GCA_002028425_01570 | Unannotated protein; Belongs to the carbohydrate kinase PfkB family. | Unannotated protein; Belongs to the peptidase M50B family. | 0.831 |
VR44_07815 | GCA_002028425_05668 | GCA_002028425_06410 | GCA_002028425_05668 | Unannotated protein. | Unannotated protein. | 0.846 |
VR44_07815 | VR44_05445 | GCA_002028425_06410 | GCA_002028425_01350 | Unannotated protein. | Unannotated protein. | 0.691 |
VR44_07815 | VR44_06780 | GCA_002028425_06410 | GCA_002028425_00666 | Unannotated protein. | Unannotated protein; Belongs to the carbohydrate kinase PfkB family. | 0.762 |
VR44_07815 | VR44_08570 | GCA_002028425_06410 | GCA_002028425_04199 | Unannotated protein. | Unannotated protein. | 0.665 |
VR44_07815 | VR44_10145 | GCA_002028425_06410 | GCA_002028425_01570 | Unannotated protein. | Unannotated protein; Belongs to the peptidase M50B family. | 0.827 |
VR44_07815 | VR44_23115 | GCA_002028425_06410 | GCA_002028425_05203 | Unannotated protein. | Unannotated protein. | 0.796 |
VR44_07815 | VR44_24345 | GCA_002028425_06410 | GCA_002028425_01958 | Unannotated protein. | Unannotated protein. | 0.890 |
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