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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN39906.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)    
Predicted Functional Partners:
KUN37999.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.823
KUN35563.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.823
KUN40953.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.820
KUN38630.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
KUN38634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
AQJ30_33325
Carrier domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
KUN38631.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.815
KUN38633.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.815
KUN33624.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.815
AQJ30_33360
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.815
Your Current Organism:
Streptomyces longwoodensis
NCBI taxonomy Id: 68231
Other names: ATCC 29251, BCRC 12034, CCRC 12034, CCRC:12034, DSM 41677, IFO 14251, JCM 4976, KCTC 9783, LMG 20096, LMG:20096, NBRC 14251, NRRL B-16923, S. longwoodensis, strain Roche X-14537
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