Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KUN40033.1Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
     
  0.862
KUN39908.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.712
KUN39909.1
PAS sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.620
KUN39911.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.599
KUN39912.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
KUN39913.1
Acyl-peptide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.537
AQJ30_08040
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
KUN40996.1
Bifunctional D-altronate/D-mannonate dehydratase; Starvation-sensing protein; maybe involved in homoserine lactone degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.498
KUN39616.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
     
  0.498
KUN33723.1
Glucarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
     
  0.498
Your Current Organism:
Streptomyces longwoodensis
NCBI taxonomy Id: 68231
Other names: ATCC 29251, BCRC 12034, CCRC 12034, CCRC:12034, DSM 41677, IFO 14251, JCM 4976, KCTC 9783, LMG 20096, LMG:20096, NBRC 14251, NRRL B-16923, S. longwoodensis, strain Roche X-14537
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