Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KUN39911.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)    
Predicted Functional Partners:
KUN39913.1
Acyl-peptide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.898
KUN39914.1
LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.880
KUN39912.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.876
KUN39915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
KUN35435.1
Glutathione ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
    
  0.768
KUN39916.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.758
KUN39909.1
PAS sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.690
KUN39049.1
Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.668
KUN39908.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.614
KUN40033.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.599
Your Current Organism:
Streptomyces longwoodensis
NCBI taxonomy Id: 68231
Other names: ATCC 29251, BCRC 12034, CCRC 12034, CCRC:12034, DSM 41677, IFO 14251, JCM 4976, KCTC 9783, LMG 20096, LMG:20096, NBRC 14251, NRRL B-16923, S. longwoodensis, strain Roche X-14537
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