Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000745715_00172 | GCA_000745715_00173 | GCA_000745715_00172 | GCA_000745715_00173 | Unannotated protein. | Unannotated protein. | 0.926 |
GCA_000745715_00172 | GCA_000745715_06125 | GCA_000745715_00172 | GCA_000745715_06125 | Unannotated protein. | Unannotated protein. | 0.580 |
GCA_000745715_00172 | GCA_000745715_07549 | GCA_000745715_00172 | GCA_000745715_07549 | Unannotated protein. | Unannotated protein. | 0.491 |
GCA_000745715_00172 | GCA_000745715_07864 | GCA_000745715_00172 | GCA_000745715_07864 | Unannotated protein. | Unannotated protein. | 0.483 |
GCA_000745715_00172 | GCA_000745715_08675 | GCA_000745715_00172 | GCA_000745715_08675 | Unannotated protein. | Unannotated protein. | 0.418 |
GCA_000745715_00172 | gatA | GCA_000745715_00172 | GCA_000745715_08676 | Unannotated protein. | Unannotated protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.418 |
GCA_000745715_00172 | gatC | GCA_000745715_00172 | GCA_000745715_08677 | Unannotated protein. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.418 |
GCA_000745715_00173 | GCA_000745715_00172 | GCA_000745715_00173 | GCA_000745715_00172 | Unannotated protein. | Unannotated protein. | 0.926 |
GCA_000745715_06125 | GCA_000745715_00172 | GCA_000745715_06125 | GCA_000745715_00172 | Unannotated protein. | Unannotated protein. | 0.580 |
GCA_000745715_06125 | GCA_000745715_07864 | GCA_000745715_06125 | GCA_000745715_07864 | Unannotated protein. | Unannotated protein. | 0.539 |
GCA_000745715_07549 | GCA_000745715_00172 | GCA_000745715_07549 | GCA_000745715_00172 | Unannotated protein. | Unannotated protein. | 0.491 |
GCA_000745715_07549 | GCA_000745715_07864 | GCA_000745715_07549 | GCA_000745715_07864 | Unannotated protein. | Unannotated protein. | 0.660 |
GCA_000745715_07864 | GCA_000745715_00172 | GCA_000745715_07864 | GCA_000745715_00172 | Unannotated protein. | Unannotated protein. | 0.483 |
GCA_000745715_07864 | GCA_000745715_06125 | GCA_000745715_07864 | GCA_000745715_06125 | Unannotated protein. | Unannotated protein. | 0.539 |
GCA_000745715_07864 | GCA_000745715_07549 | GCA_000745715_07864 | GCA_000745715_07549 | Unannotated protein. | Unannotated protein. | 0.660 |
GCA_000745715_08675 | GCA_000745715_00172 | GCA_000745715_08675 | GCA_000745715_00172 | Unannotated protein. | Unannotated protein. | 0.418 |
GCA_000745715_08675 | gatA | GCA_000745715_08675 | GCA_000745715_08676 | Unannotated protein. | Unannotated protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.885 |
GCA_000745715_08675 | gatC | GCA_000745715_08675 | GCA_000745715_08677 | Unannotated protein. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.885 |
gatA | GCA_000745715_00172 | GCA_000745715_08676 | GCA_000745715_00172 | Unannotated protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | Unannotated protein. | 0.418 |
gatA | GCA_000745715_08675 | GCA_000745715_08676 | GCA_000745715_08675 | Unannotated protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | Unannotated protein. | 0.885 |
page 1 of 2