STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745715_03318Unannotated protein. (671 aa)    
Predicted Functional Partners:
GCA_000745715_04125
Unannotated protein.
  
 0.999
GCA_000745715_03908
Unannotated protein.
  
 
 0.978
GCA_000745715_06923
Unannotated protein.
  
 
 0.978
GCA_000745715_03907
Unannotated protein.
   
 
 0.972
GCA_000745715_06922
Unannotated protein.
   
 
 0.972
GCA_000745715_08988
Unannotated protein.
  
 
 0.936
GCA_000745715_00187
Unannotated protein.
 
 
 0.933
GCA_000745715_01377
Unannotated protein.
 
 
 0.928
GCA_000745715_04518
Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.921
GCA_000745715_02423
Unannotated protein.
   
 0.917
Your Current Organism:
Streptomyces mirabilis
NCBI taxonomy Id: 68239
Other names: ATCC 27447, Actinomyces mirabilis, CBS 751.72, DSM 40553, IFO 13450, ISP 5553, JCM 4551, JCM 4791, NBRC 13450, NRRL B-2400, NRRL-ISP 5553, S. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.