Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000745715_01021 | GCA_000745715_01563 | GCA_000745715_01021 | GCA_000745715_01563 | Unannotated protein. | Unannotated protein. | 0.721 |
GCA_000745715_01021 | GCA_000745715_04276 | GCA_000745715_01021 | GCA_000745715_04276 | Unannotated protein. | Unannotated protein. | 0.984 |
GCA_000745715_01021 | GCA_000745715_04926 | GCA_000745715_01021 | GCA_000745715_04926 | Unannotated protein. | Unannotated protein. | 0.835 |
GCA_000745715_01021 | GCA_000745715_04930 | GCA_000745715_01021 | GCA_000745715_04930 | Unannotated protein. | Unannotated protein. | 0.891 |
GCA_000745715_01021 | GCA_000745715_04932 | GCA_000745715_01021 | GCA_000745715_04932 | Unannotated protein. | Unannotated protein. | 0.981 |
GCA_000745715_01021 | GCA_000745715_05910 | GCA_000745715_01021 | GCA_000745715_05910 | Unannotated protein. | Unannotated protein. | 0.945 |
GCA_000745715_01021 | cobQ | GCA_000745715_01021 | GCA_000745715_04923 | Unannotated protein. | Unannotated protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.932 |
GCA_000745715_01021 | cobS | GCA_000745715_01021 | GCA_000745715_04283 | Unannotated protein. | Unannotated protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.914 |
GCA_000745715_01021 | cobT | GCA_000745715_01021 | GCA_000745715_04278 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.927 |
GCA_000745715_01563 | GCA_000745715_01021 | GCA_000745715_01563 | GCA_000745715_01021 | Unannotated protein. | Unannotated protein. | 0.721 |
GCA_000745715_01563 | GCA_000745715_04276 | GCA_000745715_01563 | GCA_000745715_04276 | Unannotated protein. | Unannotated protein. | 0.906 |
GCA_000745715_01563 | GCA_000745715_04926 | GCA_000745715_01563 | GCA_000745715_04926 | Unannotated protein. | Unannotated protein. | 0.893 |
GCA_000745715_01563 | GCA_000745715_04930 | GCA_000745715_01563 | GCA_000745715_04930 | Unannotated protein. | Unannotated protein. | 0.996 |
GCA_000745715_01563 | GCA_000745715_04932 | GCA_000745715_01563 | GCA_000745715_04932 | Unannotated protein. | Unannotated protein. | 0.997 |
GCA_000745715_01563 | cobQ | GCA_000745715_01563 | GCA_000745715_04923 | Unannotated protein. | Unannotated protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.981 |
GCA_000745715_01563 | cobS | GCA_000745715_01563 | GCA_000745715_04283 | Unannotated protein. | Unannotated protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.961 |
GCA_000745715_01563 | cobT | GCA_000745715_01563 | GCA_000745715_04278 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.689 |
GCA_000745715_04276 | GCA_000745715_01021 | GCA_000745715_04276 | GCA_000745715_01021 | Unannotated protein. | Unannotated protein. | 0.984 |
GCA_000745715_04276 | GCA_000745715_01563 | GCA_000745715_04276 | GCA_000745715_01563 | Unannotated protein. | Unannotated protein. | 0.906 |
GCA_000745715_04276 | GCA_000745715_04926 | GCA_000745715_04276 | GCA_000745715_04926 | Unannotated protein. | Unannotated protein. | 0.990 |
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