STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745715_04453Unannotated protein. (174 aa)    
Predicted Functional Partners:
GCA_000745715_08988
Unannotated protein.
   
 0.735
GCA_000745715_04448
Unannotated protein.
       0.557
tatB
Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
       0.557
GCA_000745715_04451
Unannotated protein.
       0.557
GCA_000745715_04452
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
       0.557
GCA_000745715_08985
Unannotated protein.
  
 
 0.495
GCA_000745715_09061
Unannotated protein.
  
 
 0.495
GCA_000745715_09084
Unannotated protein.
  
 
 0.495
GCA_000745715_03727
Unannotated protein.
     
 0.486
GCA_000745715_01443
Unannotated protein.
   
  
 0.483
Your Current Organism:
Streptomyces mirabilis
NCBI taxonomy Id: 68239
Other names: ATCC 27447, Actinomyces mirabilis, CBS 751.72, DSM 40553, IFO 13450, ISP 5553, JCM 4551, JCM 4791, NBRC 13450, NRRL B-2400, NRRL-ISP 5553, S. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.