STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745715_04960Unannotated protein. (483 aa)    
Predicted Functional Partners:
GCA_000745715_06372
Unannotated protein; Belongs to the SEDS family.
 
 0.979
GCA_000745715_03115
Unannotated protein; Belongs to the SEDS family.
 
 0.978
GCA_000745715_02245
Unannotated protein; Belongs to the SEDS family.
 
 0.928
GCA_000745715_04181
Unannotated protein.
 
 
 0.922
GCA_000745715_04188
Unannotated protein.
  
  
0.822
GCA_000745715_02662
Unannotated protein.
 
 
0.804
GCA_000745715_02242
Unannotated protein; Involved in formation and maintenance of cell shape.
 
 
 0.800
GCA_000745715_02244
Unannotated protein.
  
  
 
0.766
GCA_000745715_03177
Unannotated protein.
 
 
0.738
GCA_000745715_07342
Unannotated protein.
 
 
0.736
Your Current Organism:
Streptomyces mirabilis
NCBI taxonomy Id: 68239
Other names: ATCC 27447, Actinomyces mirabilis, CBS 751.72, DSM 40553, IFO 13450, ISP 5553, JCM 4551, JCM 4791, NBRC 13450, NRRL B-2400, NRRL-ISP 5553, S. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.