Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000745715_04761 | GCA_000745715_05365 | GCA_000745715_04761 | GCA_000745715_05365 | Unannotated protein. | Unannotated protein. | 0.978 |
GCA_000745715_04761 | GCA_000745715_05366 | GCA_000745715_04761 | GCA_000745715_05366 | Unannotated protein. | Unannotated protein. | 0.833 |
GCA_000745715_04761 | GCA_000745715_05831 | GCA_000745715_04761 | GCA_000745715_05831 | Unannotated protein. | Unannotated protein. | 0.995 |
GCA_000745715_04761 | GCA_000745715_08032 | GCA_000745715_04761 | GCA_000745715_08032 | Unannotated protein. | Unannotated protein. | 0.990 |
GCA_000745715_04761 | GCA_000745715_08794 | GCA_000745715_04761 | GCA_000745715_08794 | Unannotated protein. | Unannotated protein. | 0.989 |
GCA_000745715_04761 | rpsD | GCA_000745715_04761 | GCA_000745715_00938 | Unannotated protein. | Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.995 |
GCA_000745715_04761 | rpsK | GCA_000745715_04761 | GCA_000745715_03754 | Unannotated protein. | Unannotated protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.995 |
GCA_000745715_05365 | GCA_000745715_04761 | GCA_000745715_05365 | GCA_000745715_04761 | Unannotated protein. | Unannotated protein. | 0.978 |
GCA_000745715_05365 | GCA_000745715_05366 | GCA_000745715_05365 | GCA_000745715_05366 | Unannotated protein. | Unannotated protein. | 0.808 |
GCA_000745715_05365 | GCA_000745715_05831 | GCA_000745715_05365 | GCA_000745715_05831 | Unannotated protein. | Unannotated protein. | 0.870 |
GCA_000745715_05365 | GCA_000745715_08032 | GCA_000745715_05365 | GCA_000745715_08032 | Unannotated protein. | Unannotated protein. | 0.935 |
GCA_000745715_05365 | GCA_000745715_08794 | GCA_000745715_05365 | GCA_000745715_08794 | Unannotated protein. | Unannotated protein. | 0.939 |
GCA_000745715_05365 | rpsD | GCA_000745715_05365 | GCA_000745715_00938 | Unannotated protein. | Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
GCA_000745715_05365 | rpsK | GCA_000745715_05365 | GCA_000745715_03754 | Unannotated protein. | Unannotated protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
GCA_000745715_05366 | GCA_000745715_04761 | GCA_000745715_05366 | GCA_000745715_04761 | Unannotated protein. | Unannotated protein. | 0.833 |
GCA_000745715_05366 | GCA_000745715_05365 | GCA_000745715_05366 | GCA_000745715_05365 | Unannotated protein. | Unannotated protein. | 0.808 |
GCA_000745715_05366 | GCA_000745715_05579 | GCA_000745715_05366 | GCA_000745715_05579 | Unannotated protein. | Unannotated protein. | 0.832 |
GCA_000745715_05366 | GCA_000745715_05831 | GCA_000745715_05366 | GCA_000745715_05831 | Unannotated protein. | Unannotated protein. | 0.743 |
GCA_000745715_05366 | GCA_000745715_08032 | GCA_000745715_05366 | GCA_000745715_08032 | Unannotated protein. | Unannotated protein. | 0.742 |
GCA_000745715_05366 | GCA_000745715_08794 | GCA_000745715_05366 | GCA_000745715_08794 | Unannotated protein. | Unannotated protein. | 0.742 |
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