STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745715_07042Unannotated protein; Belongs to the aldehyde dehydrogenase family. (500 aa)    
Predicted Functional Partners:
GCA_000745715_08988
Unannotated protein.
  
 0.865
GCA_000745715_07043
Unannotated protein; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
 
 0.847
GCA_000745715_03526
Unannotated protein.
    
0.799
GCA_000745715_04125
Unannotated protein.
  
 
 0.786
GCA_000745715_07040
Unannotated protein.
 
     0.777
GCA_000745715_01107
Unannotated protein.
   
 
 0.776
GCA_000745715_08351
Unannotated protein.
   
 0.770
GCA_000745715_07041
Unannotated protein.
 
     0.768
GCA_000745715_08985
Unannotated protein.
  
 0.760
GCA_000745715_09061
Unannotated protein.
  
 0.760
Your Current Organism:
Streptomyces mirabilis
NCBI taxonomy Id: 68239
Other names: ATCC 27447, Actinomyces mirabilis, CBS 751.72, DSM 40553, IFO 13450, ISP 5553, JCM 4551, JCM 4791, NBRC 13450, NRRL B-2400, NRRL-ISP 5553, S. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.