STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745715_08783Unannotated protein. (243 aa)    
Predicted Functional Partners:
GCA_000745715_05659
Unannotated protein.
  
  
  0.919
GCA_000745715_08782
Unannotated protein; Belongs to the peptidase S33 family.
       0.885
GCA_000745715_08784
Unannotated protein.
       0.776
GCA_000745715_02312
Unannotated protein.
    
  0.698
GCA_000745715_03183
Unannotated protein.
   
   0.698
GCA_000745715_06574
Unannotated protein.
   
   0.698
GCA_000745715_03477
Unannotated protein.
      0.677
GCA_000745715_03726
Unannotated protein.
 
    0.608
ung-2
Unannotated protein; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
    
 0.579
GCA_000745715_00735
Unannotated protein.
       0.526
Your Current Organism:
Streptomyces mirabilis
NCBI taxonomy Id: 68239
Other names: ATCC 27447, Actinomyces mirabilis, CBS 751.72, DSM 40553, IFO 13450, ISP 5553, JCM 4551, JCM 4791, NBRC 13450, NRRL B-2400, NRRL-ISP 5553, S. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.