STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717725_04108Unannotated protein. (874 aa)    
Predicted Functional Partners:
GCA_000717725_02063
Unannotated protein.
 
 0.979
GCA_000717725_01316
Unannotated protein.
 
 
 0.937
GCA_000717725_02110
Unannotated protein.
 
 
 0.930
GCA_000717725_03577
Unannotated protein.
  
  
0.911
GCA_000717725_03587
Unannotated protein.
  
  
 
0.910
GCA_000717725_03576
Unannotated protein.
 
 
 
0.899
GCA_000717725_04400
Unannotated protein.
  
 0.867
GCA_000717725_00674
Unannotated protein.
     
 0.808
GCA_000717725_03685
Unannotated protein.
 
  0.793
GCA_000717725_03664
Unannotated protein.
  
 
 0.791
Your Current Organism:
Streptomyces pyridomyceticus
NCBI taxonomy Id: 68260
Other names: S. pyridomyceticus, Streptomyces albidofuscus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.