STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717725_04127Unannotated protein. (144 aa)    
Predicted Functional Partners:
GCA_000717725_01628
Unannotated protein.
   
   0.985
GCA_000717725_01627
Unannotated protein.
   
 
 0.962
GCA_000717725_02793
Unannotated protein.
  
 
 0.962
GCA_000717725_04372
Unannotated protein.
  
 
 0.959
GCA_000717725_04373
Unannotated protein.
  
 
 0.959
GCA_000717725_04332
Unannotated protein.
   
 
 0.955
GCA_000717725_04325
Unannotated protein.
   
   0.952
GCA_000717725_04328
Unannotated protein.
   
   0.950
GCA_000717725_04346
Unannotated protein.
   
   0.945
GCA_000717725_01481
Unannotated protein.
   
 
 0.944
Your Current Organism:
Streptomyces pyridomyceticus
NCBI taxonomy Id: 68260
Other names: S. pyridomyceticus, Streptomyces albidofuscus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.