STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717725_04408Unannotated protein. (323 aa)    
Predicted Functional Partners:
GCA_000717725_04409
Unannotated protein.
 
 
 0.997
GCA_000717725_04407
Unannotated protein.
  
  
 0.956
GCA_000717725_04410
Unannotated protein.
       0.765
GCA_000717725_04401
Unannotated protein.
 
 
 0.760
GCA_000717725_05383
Unannotated protein.
  
 
 0.722
GCA_000717725_04406
Unannotated protein.
       0.671
GCA_000717725_02121
Unannotated protein.
  
  
 0.669
GCA_000717725_04403
Unannotated protein.
     
 0.655
GCA_000717725_04405
Unannotated protein.
     
 0.653
GCA_000717725_04404
Unannotated protein.
       0.650
Your Current Organism:
Streptomyces pyridomyceticus
NCBI taxonomy Id: 68260
Other names: S. pyridomyceticus, Streptomyces albidofuscus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.