STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4R28_19065Unannotated protein. (608 aa)    
Predicted Functional Partners:
A4R28_24830
Unannotated protein.
  
  
 
0.907
A4R28_03155
Unannotated protein.
    
 0.825
A4R28_05635
Unannotated protein.
  
  
 0.771
recA
Unannotated protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
    
   0.752
A4R28_16115
Unannotated protein.
     
 0.740
GCA_000474725_01884
Unannotated protein.
    
 0.727
GCA_000474725_02989
Unannotated protein.
    
 0.727
A4R28_24310
Unannotated protein.
     
 0.693
A4R28_24440
Unannotated protein.
     
 0.693
fbpC
Unannotated protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
     
 0.693
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.