Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4R28_03380 | A4R28_07675 | GCA_000474725_05030 | GCA_000474725_03726 | Unannotated protein. | Unannotated protein. | 0.999 |
A4R28_03380 | A4R28_28380 | GCA_000474725_05030 | GCA_000474725_06745 | Unannotated protein. | Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...] | 0.993 |
A4R28_03380 | GCA_000474725_01861 | GCA_000474725_05030 | GCA_000474725_01861 | Unannotated protein. | Unannotated protein. | 0.947 |
A4R28_03380 | GCA_000474725_02720 | GCA_000474725_05030 | GCA_000474725_02720 | Unannotated protein. | Unannotated protein. | 0.804 |
A4R28_03380 | dnaE2 | GCA_000474725_05030 | GCA_000474725_01860 | Unannotated protein. | Unannotated protein; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.947 |
A4R28_03380 | dnaQ | GCA_000474725_05030 | GCA_000474725_00652 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.929 |
A4R28_03380 | dnaX | GCA_000474725_05030 | GCA_000474725_06802 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.999 |
A4R28_03380 | holA | GCA_000474725_05030 | GCA_000474725_00635 | Unannotated protein. | Unannotated protein. | 0.998 |
A4R28_07675 | A4R28_03380 | GCA_000474725_03726 | GCA_000474725_05030 | Unannotated protein. | Unannotated protein. | 0.999 |
A4R28_07675 | A4R28_23815 | GCA_000474725_03726 | GCA_000474725_01859 | Unannotated protein. | Unannotated protein. | 0.803 |
A4R28_07675 | A4R28_28380 | GCA_000474725_03726 | GCA_000474725_06745 | Unannotated protein. | Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...] | 0.999 |
A4R28_07675 | GCA_000474725_01861 | GCA_000474725_03726 | GCA_000474725_01861 | Unannotated protein. | Unannotated protein. | 0.986 |
A4R28_07675 | GCA_000474725_02711 | GCA_000474725_03726 | GCA_000474725_02711 | Unannotated protein. | Unannotated protein. | 0.797 |
A4R28_07675 | GCA_000474725_02720 | GCA_000474725_03726 | GCA_000474725_02720 | Unannotated protein. | Unannotated protein. | 0.887 |
A4R28_07675 | dnaE2 | GCA_000474725_03726 | GCA_000474725_01860 | Unannotated protein. | Unannotated protein; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.986 |
A4R28_07675 | dnaQ | GCA_000474725_03726 | GCA_000474725_00652 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.931 |
A4R28_07675 | dnaX | GCA_000474725_03726 | GCA_000474725_06802 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.999 |
A4R28_07675 | holA | GCA_000474725_03726 | GCA_000474725_00635 | Unannotated protein. | Unannotated protein. | 0.999 |
A4R28_23815 | A4R28_07675 | GCA_000474725_01859 | GCA_000474725_03726 | Unannotated protein. | Unannotated protein. | 0.803 |
A4R28_23815 | A4R28_28380 | GCA_000474725_01859 | GCA_000474725_06745 | Unannotated protein. | Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...] | 0.974 |
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