Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4R28_01375 | A4R28_15505 | GCA_000474725_05748 | GCA_000474725_02241 | Unannotated protein. | Unannotated protein. | 0.948 |
A4R28_01375 | A4R28_15510 | GCA_000474725_05748 | GCA_000474725_02240 | Unannotated protein. | Unannotated protein. | 0.948 |
A4R28_01375 | A4R28_26370 | GCA_000474725_05748 | GCA_000474725_00259 | Unannotated protein. | Unannotated protein. | 0.638 |
A4R28_01375 | GCA_000474725_04729 | GCA_000474725_05748 | GCA_000474725_04729 | Unannotated protein. | Unannotated protein. | 0.646 |
A4R28_01375 | hldD | GCA_000474725_05748 | GCA_000474725_02242 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.452 |
A4R28_04190 | A4R28_15475 | GCA_000474725_04845 | GCA_000474725_02245 | Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Unannotated protein. | 0.556 |
A4R28_04190 | A4R28_15505 | GCA_000474725_04845 | GCA_000474725_02241 | Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Unannotated protein. | 0.951 |
A4R28_04190 | A4R28_15510 | GCA_000474725_04845 | GCA_000474725_02240 | Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Unannotated protein. | 0.955 |
A4R28_04190 | GCA_000474725_02246 | GCA_000474725_04845 | GCA_000474725_02246 | Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Unannotated protein. | 0.736 |
A4R28_04190 | hldE | GCA_000474725_04845 | GCA_000474725_02244 | Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Unannotated protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | 0.617 |
A4R28_06535 | A4R28_15505 | GCA_000474725_04086 | GCA_000474725_02241 | Unannotated protein. | Unannotated protein. | 0.948 |
A4R28_06535 | A4R28_15510 | GCA_000474725_04086 | GCA_000474725_02240 | Unannotated protein. | Unannotated protein. | 0.948 |
A4R28_15475 | A4R28_04190 | GCA_000474725_02245 | GCA_000474725_04845 | Unannotated protein. | Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.556 |
A4R28_15475 | A4R28_15505 | GCA_000474725_02245 | GCA_000474725_02241 | Unannotated protein. | Unannotated protein. | 0.935 |
A4R28_15475 | A4R28_15510 | GCA_000474725_02245 | GCA_000474725_02240 | Unannotated protein. | Unannotated protein. | 0.939 |
A4R28_15475 | GCA_000474725_02246 | GCA_000474725_02245 | GCA_000474725_02246 | Unannotated protein. | Unannotated protein. | 0.996 |
A4R28_15475 | hldD | GCA_000474725_02245 | GCA_000474725_02242 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.860 |
A4R28_15475 | hldE | GCA_000474725_02245 | GCA_000474725_02244 | Unannotated protein. | Unannotated protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | 0.999 |
A4R28_15505 | A4R28_01375 | GCA_000474725_02241 | GCA_000474725_05748 | Unannotated protein. | Unannotated protein. | 0.948 |
A4R28_15505 | A4R28_04190 | GCA_000474725_02241 | GCA_000474725_04845 | Unannotated protein. | Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.951 |
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