STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000474725_03021Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_000474725_01074
Unannotated protein.
   
   0.729
A4R28_20585
Unannotated protein.
   
   0.729
ribB
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.656
A4R28_19445
Unannotated protein.
  
  
  0.589
A4R28_12050
Unannotated protein.
 
 
   0.479
A4R28_13025
Unannotated protein.
     
 0.462
A4R28_02025
Unannotated protein.
     
 0.456
A4R28_27205
Unannotated protein.
  
     0.442
GCA_000474725_02099
Unannotated protein.
 
  
 0.430
A4R28_28805
Unannotated protein.
    
 0.419
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.