STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4R28_31055Unannotated protein; Belongs to the ABC transporter superfamily. (270 aa)    
Predicted Functional Partners:
A4R28_31050
Unannotated protein.
  0.972
A4R28_31045
Unannotated protein.
 
  0.972
ugpE
Unannotated protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
  0.921
GCA_000474725_05334
Unannotated protein.
  
  0.909
A4R28_14090
Unannotated protein.
 
  0.892
GCA_000474725_05333
Unannotated protein.
  
  0.888
GCA_000474725_05327
Unannotated protein.
  
  0.881
GCA_000474725_01267
Unannotated protein.
 
  0.880
A4R28_14085
Unannotated protein.
  
  0.876
A4R28_06920
Unannotated protein.
  
  0.874
Your Current Organism:
Mesorhizobium ciceri ca181
NCBI taxonomy Id: 682633
Other names: M. ciceri ca181, Mesorhizobium ciceri str. ca181, Mesorhizobium ciceri strain ca181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.